FIMM Single-Cell Analytics

Overview of Services

FIMM Single-Cell Analytics (SCA) unit develops and provides open-access single-cell transcriptomics and genomics services nationally and internationally. Our unit collaborates closely with the FIMM Genomics Sequencing unit as well as with the FIMM Technology Centre IT Services, Digital Microscopy and Molecular Pathology unit and FIMM HiPREP unit.

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FIMM Single-Cell Analytics is a non-profit academic core facility. We are part of HILIFE and Biocenter Finland Single-Cell omics networks. 

Login Credentials     

HAKA federated authentication.

Preferred way to login to FIMM Single-Cell Analytics Core iLAB is to use HAKA authentication. HAKA is the identity federation for the Finnish univerities and research institutes. HAKA is operated by CSC.

iLAB user account

When your host institution is not a member of HAKA identity federation click 'Register' and we'll  create you the credentials for accessing iLAB Core Facility management system. These iLAB credentials are separate from your host organization. 

Leadership

Jenni Lahtela (on parental leave) - Substitute Päivi Lahermo
Head of Unit

Core contact information

For project inquiries:

Single-cell sequencing projects: fimm-sca-singlecell@helsinki.fi

Spatial transcriptomics projects: fimm-sca-spatial@helsinki.fi

Core personnel:

Jenni Lahtela, Head of Unit, Tel: +358 50 319 8725, E-mail: jenni.lahtela@helsinki.fi

Päivi Lahermo, Substitute Head of Unit, Tel: +358 50 415 1182, E-mail: paivi.lahermo@helsinki.fi

Emma Saarinen, Single Cell Laboratory Coordinator, Tel: +358 50 3185062, E-mail: emma.a.saarinen@helsinki.fi

Janika Sirjala, Single Cell Laboratory Coordinator, Tel: +358 50 4799276, E-mail: janika.sirjala@helsinki.fi

Salla Hyyppä, Single Cell Laboratory Coordinator, Tel: +358 50 4489495, E-mail: salla.hyyppa@helsinki.fi

Simona Bramante, Spatial Transcriptomics Laboratory Coordinator, Tel: +358 50 3207268, E-mail: simona.bramante@helsinki.fi

Marika Kuisma-van der Linden, Spatial Transcriptomics Laboratory Coordinator, Tel: +358 50 3150168, E-mail: marika.kuisma@helsinki.fi

Bishwa Ghimire, Bioinformatician, Tel: +358 50 3112564, E-mail: bishwa.ghimire@helsinki.fi

Location and hours of operation

Links and Resources

1. https://www.helsinki.fi/en/infrastructures/single-cell-omics/infrastructures/single-cell-analytics-fimm

Contacts

Available Equipment and Resources